WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00128690 Gene Name  Cjp-glr-2
Sequence Name  ? CJA09486 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable ligand-gated monoatomic ion channel activity and signaling receptor activity. Predicted to be involved in monoatomic ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans glr-2. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA09486c.1 CJA09486c.1   [unknown]
Transcript:CJA09486b.1 CJA09486b.1   [unknown]
Transcript:CJA09486a.1 CJA09486a.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA09486c CJA09486c   [unknown]
CDS:CJA09486a CJA09486a   [unknown]
CDS:CJA09486b CJA09486b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-glr-2, AAGAATAGCGTCTTCTTGTTGGTGGTTCTTCACACTAATTATTGTTTCTTCGTACACTGC, WBGene00128690   Expr1083748 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in
  enables
  located_in

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in
  enables
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region