WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00127420 Gene Name  CJA08216
Sequence Name  ? CJA08216 Organism  Caenorhabditis japonica
Automated Description  Predicted to be involved in intracellular protein transport. Predicted to be part of Ric1-Rgp1 guanyl-nucleotide exchange factor complex. Is an ortholog of C. elegans R06F6.8. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA08216a.1 CJA08216a.1   [unknown]
Transcript:CJA08216b.1 CJA08216b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA08216b CJA08216b   [unknown]
CDS:CJA08216a CJA08216a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA08216, CGGACAGAAACTACAATCATTTGGTGGTGGCTGGAAATCAAGGAATCGCCTATTGCGCAC, WBGene00127420   Expr1079070 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA20595, GATAGCCACTAAATTGAATGGATCTTTCACGAAGCCGATGAACGGAGAGCGTAGACAACG, WBGene00176167   Expr1081326 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  involved_in
  part_of

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region