WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00124678 Gene Name  Cjp-ndc-80
Sequence Name  ? CJA05474 Organism  Caenorhabditis japonica
Automated Description  Predicted to be involved in attachment of mitotic spindle microtubules to kinetochore. Predicted to be part of Ndc80 complex. Is an ortholog of C. elegans ndc-80. In C. elegans, ndc-80 is involved in several processes, including chromosome organization; gonad morphogenesis; and positive regulation of kinetochore assembly. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA05474.1 CJA05474.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA05474 CJA05474   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-ndc-80, CTAAAAGTTGGTTGGGACGCGCTCAACAATCAGTGGCTTCCAGAAGTGAATCGCCAACTT, WBGene00124678   Expr1076375 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  part_of
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  part_of
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region