WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00124448 Gene Name  Cjp-sir-2.4
Sequence Name  ? CJA05244 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable NAD+ binding activity. Is an ortholog of C. elegans sir-2.4. In C. elegans, sir-2.4 is involved in P granule assembly and response to heat. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA05244b.1 CJA05244b.1   [unknown]
Transcript:CJA05244a.1 CJA05244a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA05244b CJA05244b   [unknown]
CDS:CJA05244a CJA05244a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-sir-2.4, ATCATTCCGATGGGATCGTTGCCGATCGACGCTATGAATAAAAATATCAAAACGACGACC, WBGene00124448   Expr1084203 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA03988, CGAAACAGAAACATCATCGTGGCTTGCAAGCCTGCCGAAGCCGATTCCTAGTGAGTTAAT, WBGene00123192   Expr1086918 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region