WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00124385 Gene Name  Cjp-sec-8
Sequence Name  ? CJA05181 Organism  Caenorhabditis japonica
Automated Description  Predicted to be involved in vesicle docking involved in exocytosis and vesicle tethering involved in exocytosis. Predicted to be part of exocyst. Is an ortholog of C. elegans sec-8. In C. elegans, sec-8 is involved in vesicle tethering involved in exocytosis. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA05181b.1 CJA05181b.1   [unknown]
Transcript:CJA05181a.1 CJA05181a.1   [unknown]
Transcript:CJA05181c.1 CJA05181c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA05181c CJA05181c   [unknown]
CDS:CJA05181b CJA05181b   [unknown]
CDS:CJA05181a CJA05181a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-sec-8, GCAAAATGTACACGGAACGGCTCGTAAACAACTTTTCCGGTTCGACAACACGGCATGCGC, WBGene00181940   Expr1086567 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA05181, CGCGCTATCAGTCCGCAGTGATAAAACGCTGGCAAGTCAGCACGGAGCACTCGAAAAACG, WBGene00124385   Expr1071378 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  involved_in
  part_of
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  part_of
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region