WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00124100 Gene Name  Cjp-daf-16
Sequence Name  ? CJA04896 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable DNA-binding transcription factor activity and sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans daf-16. In C. elegans, daf-16 is involved in several processes, including regulation of dauer larval development; regulation of metabolic process; and response to stress. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA04896.1 CJA04896.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA04896 CJA04896   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

4 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA29120, TTACGAATGGATGGTGCAGAATGTTCCATACTTCCGTGACAAAGGAGACTCAAACAGCTC, WBGene00184694   Expr1083605 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA03107, ACTCGCCAGATGGCTCCGGTCACCCTGCTTCTTTTTCATCCGAGTTGGTTTTTAAATTAA, WBGene00122311   Expr1078525 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-daf-16, GAATCTGTGCCCAACATTCCCAGCGATATCGTTGATAGGACTGATCAGGTAAGAACTTTT, WBGene00124100   Expr1091225 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA20530, GAACAAGAGGTACGTGTTATTATGGCACTGGGACGTTTCGAAACTTTTTTTGCATTTTTG, WBGene00176102   Expr1091465 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  enables

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region