WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00122755 Gene Name  Cjp-slo-1
Sequence Name  ? CJA03551 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable monoatomic ion channel activity. Predicted to be involved in potassium ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans slo-1. In C. elegans, slo-1 is involved in several processes, including behavioral response to ethanol; nematode pharyngeal pumping; and sarcomere organization. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA03551.1 CJA03551.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA03551 CJA03551   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-slo-1, CCCTGGTCCTAATATAGTAATACAGCCGCAAACACAAGGATTTTTTATTGCGCAGAGCGC, WBGene00122755   Expr1085143 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  involved_in
  enables
  involved_in
  involved_in
  located_in

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  enables
  involved_in
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region