WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00122248 Gene Name  Cjp-plc-1
Sequence Name  ? CJA03044 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable guanyl-nucleotide exchange factor activity and phosphatidylinositol-4,5-bisphosphate phospholipase C activity. Predicted to be involved in lipid metabolic process and small GTPase-mediated signal transduction. Is an ortholog of C. elegans plc-1. In C. elegans, plc-1 is involved in several processes, including 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process; defense response to Gram-positive bacterium; and positive regulation of protein import into nucleus. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA03044c.1 CJA03044c.1   [unknown]
Transcript:CJA03044d.1 CJA03044d.1   [unknown]
Transcript:CJA03044a.1 CJA03044a.1   [unknown]
Transcript:CJA03044b.1 CJA03044b.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA03044a CJA03044a   [unknown]
CDS:CJA03044b CJA03044b   [unknown]
CDS:CJA03044c CJA03044c   [unknown]
CDS:CJA03044d CJA03044d   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA03044, TCAACGTGTAGCATGCTGGAGACGTCATCAGCGAAAGAATCGGCTCGGAGAAAATCATTG, WBGene00122248   Expr1070899 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA22432, ACGGTCACTTCCCACCATATCAGCGAGAAGCAGAACAAAATCTACAATGCTCTGGCATTG, WBGene00178004   Expr1085850 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-frm-9, AAGTTGGCCGCGTTTGGTTGCAAAGTTTTCCAAGTCAAAGAGCTGCTACACGGTCGAACA, WBGene00129520   Expr1082616 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

7 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  involved_in
  involved_in
  involved_in

0 Homologues

0 Locations

7 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  involved_in
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region