WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00122225 Gene Name  Cjp-dkf-1
Sequence Name  ? CJA03021 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable ATP binding activity; chondroitin 4-sulfotransferase activity; and protein serine/threonine kinase activity. Predicted to be involved in chondroitin sulfate proteoglycan biosynthetic process; positive regulation of response to oxidative stress; and protein phosphorylation. Predicted to be located in membrane. Is an ortholog of C. elegans dkf-1. In C. elegans, dkf-1 is involved in several processes, including defense response to Gram-positive bacterium; determination of adult lifespan; and positive regulation of protein import into nucleus. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA03021a.1 CJA03021a.1   [unknown]
Transcript:CJA03021b.1 CJA03021b.1   [unknown]
Transcript:CJA03021c.1 CJA03021c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA03021a CJA03021a   [unknown]
CDS:CJA03021b CJA03021b   [unknown]
CDS:CJA03021c CJA03021c   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA17410, TGGAGTTGTTGGTCAAAATGTTTTATCATGATTTTGTGTTGTTTAATTTTACTCTACCGG, WBGene00136614   Expr1084558 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-dkf-1, AAGCACGCATGTCCATCGAGCAGTGCCTGGAGCACGAGTGGCTAAAAGGCGAGCAACTGT, WBGene00122225   Expr1076001 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

9 GO Annotation

Annotation Extension Qualifier
  involved_in
  involved_in
  located_in
  enables
  enables
  enables
  enables
  involved_in
  enables

0 Homologues

0 Locations

9 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  involved_in
  located_in
  enables
  enables
  enables
  enables
  involved_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region