WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00121216 Gene Name  Cjp-brc-1
Sequence Name  ? CJA02012 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable DNA binding activity; ubiquitin-protein transferase activity; and zinc ion binding activity. Predicted to be involved in DNA repair. Predicted to be located in nucleus. Is an ortholog of C. elegans brc-1. In C. elegans, brc-1 is involved in several processes, including DNA repair; nuclear chromosome segregation; and positive regulation of double-strand break repair via homologous recombination. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA02012.1 CJA02012.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA02012 CJA02012   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-brc-1, GGATAGCATCAGCGAGTACTCTATTCTGCCAACCGACGAGTACAAGGCGGTAAAATTGGC, WBGene00121216   Expr1091422 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

7 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  involved_in
  involved_in
  located_in

0 Homologues

0 Locations

7 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  involved_in
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region