WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00120547 Gene Name  Cjp-isw-1
Sequence Name  ? CJA01343 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable ATP binding activity; DNA binding activity; and nucleosome binding activity. Predicted to be involved in chromatin remodeling. Predicted to be located in nucleus. Is an ortholog of C. elegans isw-1. In C. elegans, isw-1 is involved in positive regulation of transcription by RNA polymerase II and positive regulation of vulval development. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA01343.1 CJA01343.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA01343 CJA01343   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA20426, TGTTCCAGGCCGACAAGCCCAAAGACGTGCCAGCAAAAGAGGCTGAAAAACGTCAAGCTG, WBGene00175998   Expr1088749 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA01534, AAAAGTCGTACCGCTATGGAGCTTCAGCGCCGTTGTAACACGCTAATCACGCTCATTGAA, WBGene00120738   Expr1077754 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-isw-1, CCATGAGAACTGGAAATCCCAGCGAAAAACAGTCGAAGGCACCGCGGCCAAAGTTGCCGC, WBGene00120547   Expr1082634 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  located_in
  involved_in

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  located_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region