WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00119538 Gene Name  Cjp-ajm-1
Sequence Name  ? CJA00334 Organism  Caenorhabditis japonica
Automated Description  Predicted to be involved in cell-cell junction organization. Is an ortholog of C. elegans ajm-1. In C. elegans, ajm-1 is involved in cell-cell junction organization and embryo development. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA00334a.1 CJA00334a.1   [unknown]
Transcript:CJA00334b.1 CJA00334b.1   [unknown]
Transcript:CJA00334c.1 CJA00334c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA00334a CJA00334a   [unknown]
CDS:CJA00334c CJA00334c   [unknown]
CDS:CJA00334b CJA00334b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-ajm-1, TACTGTCGCTGCTCTGATTGCAGAAAGAAAAGAACCATCTCTTATTGCTTTGTGTCAACG, WBGene00119538   Expr1072645 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA07574, TCTGCATCCATCACATTTGACGGAAAGGCTGACGAGCAAGATTTGCTAAACGAATCGTTT, WBGene00126778   Expr1081059 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  involved_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region