WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00119407 Gene Name  Cjp-snf-6
Sequence Name  ? CJA00203 Organism  Caenorhabditis japonica
Automated Description  Predicted to be located in membrane. Is an ortholog of C. elegans snf-6. In C. elegans, snf-6 is involved in acetylcholine transport; choline transport; and positive regulation of locomotion. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA00203b.1 CJA00203b.1   [unknown]
Transcript:CJA00203a.1 CJA00203a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA00203a CJA00203a   [unknown]
CDS:CJA00203b CJA00203b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-snf-6, GCTCGACTGGCACTCGATTCAATACGAATCTTATCGATTCCCGTACTGGTCAATTATCAC, WBGene00119407   Expr1077171 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA03579, ACAGGTCAGCAAATTCCAGGACACTGCCGGCAAGGCGATGAAACATCACAACTATCTGCT, WBGene00122783   Expr1076892 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  located_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region