WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00119339 Gene Name  Cjp-sqv-5
Sequence Name  ? CJA00136 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable acetylgalactosaminyltransferase activity. Predicted to be located in Golgi cisterna membrane. Is an ortholog of C. elegans sqv-5. In C. elegans, sqv-5 is involved in several processes, including egg-laying behavior; positive regulation of vulval development; and vulval development. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA00136b.1 CJA00136b.1   [unknown]
Transcript:CJA00136a.1 CJA00136a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA00136a CJA00136a   [unknown]
CDS:CJA00136b CJA00136b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-sqv-5, CATTTACCACCCGATCCATTGCGATGAGAACATGCCAACAGCTCAAAAAGACATGTGCCA, WBGene00119339   Expr1086664 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  located_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region