WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00114980 Gene Name  Ppa-tra-1.1
Sequence Name  ? PPA25426 Brief Description  Ppa-tra-1 encodes Zn2+-finger-containing proteins; during development, Ppa-tra-1 functions as a key regulator of the sex determination pathway and positively regulates all aspects of hermaphrodite somatic sexual differentiation; the sequence similarity of Ppa-TRA-1 and Cel-TRA-1 is limited to the Zn2+-finger domain.
Organism  Pristionchus pacificus Automated Description  Is predicted to encode a protein with the following domains: Zinc finger, C2H2 type; Zinc finger C2H2-type; and Zinc finger C2H2 superfamily. Is an ortholog of C. elegans tra-1. In C. elegans, tra-1 is involved in developmental process involved in reproduction; negative regulation of transcription by RNA polymerase II; and positive regulation of neuron apoptotic process.
Biotype  SO:0001217 Genetic Position  :±
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:PPA25426.1 PPA25426.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA25426 PPA25426   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

0 Expression Patterns

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  located_in
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  located_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region