WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00101073 Gene Name  PPA11519
Sequence Name  ? PPA11519 Brief Description  Ppa-egl-20 encodes a member of the WNT family of developmental signaling proteins that induces, in a redundant manner with other WNT family ligands, the formation of the vulva; expressed in muscle and epidermal cells at the posterior of the worm, making it the first inductive signal for vulva development to be expressed outside of the gonad.
Organism  Pristionchus pacificus Automated Description  Predicted to enable ATP binding activity; ATP hydrolysis activity; and signaling receptor binding activity. Predicted to be involved in Wnt signaling pathway. Predicted to be located in extracellular region. Expressed in tail and vulval precursor cell. Is an ortholog of C. elegans C10G11.8.
Biotype  SO:0001217 Genetic Position  :±
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:PPA11519.1 PPA11519.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA11519 PPA11519   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
    Expr12782 Ppa-lin-17 /Fz expression was found in the posterior body region surrounding the rectal area in all larval stages. Coexpression of Ppa-lin-17 /Fz::RFP with Ppa-egl-20 /Wnt::GFP indicates that the two genes have an overlapping expression pattern during larval development that is, however, not completely identical. Low level Ppa-lin-17 /Fz::RFP expression is also seen in more anterior regions including the VPCs during the J3 larval stage. All described expression patterns were highly reproducible and were observed in several independent transgenic lines.  

4 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  located_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region