WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00091849 Gene Name  PPA02295
Sequence Name  ? PPA02295 Organism  Pristionchus pacificus
Automated Description  Is predicted to encode a protein with the following domains: Tumour protein D52 and Tumour protein D52 family. Is an ortholog of C. elegans nep-17. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:PPA02295.1 PPA02295.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA02295 PPA02295   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
Yeast culture: C.albidus Transcripts that showed significantly increased expression after fed with yeast culture C.albidus, comparing to fed with OP50. Cuffdiff (version 2.0.1) WBPaper00050265:C.albidus_vs_OP50_upregulated

0 Expression Patterns

2 GO Annotation

Annotation Extension Qualifier
  part_of
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  part_of
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region