WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00069185 Gene Name  Cre-atp-2
Sequence Name  ? CRE29320 Organism  Caenorhabditis remanei
Automated Description  Predicted to enable ATP binding activity and proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in proton motive force-driven ATP synthesis and proton transmembrane transport. Predicted to be part of proton-transporting ATP synthase complex. Is an ortholog of C. elegans atp-2. In C. elegans, atp-2 is involved in several processes, including determination of adult lifespan; inductive cell migration; and nematode pharyngeal pumping. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE29320.1 CRE29320.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE29320 CRE29320   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Proteins expressed in activated sperm fraction after C. remanei spermatids were activated in vitro. N.A WBPaper00054996:activated_sperm_CRE
  Proteins expressed in unactivated C. remanei spermatids. N.A WBPaper00054996:unactivated_spermatid_CRE

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cre-atp-2, AATCGATGATGTGTTCCAGAAGGCCGAGGAGCTCGCCAAGCAACACGCCGAAAGACAACA, WBGene00069185   Expr1112414 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

6 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  enables
  involved_in
  involved_in
  part_of

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  enables
  involved_in
  involved_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region