WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00060554 Gene Name  Cre-vps-4
Sequence Name  ? CRE03739 Organism  Caenorhabditis remanei
Automated Description  Predicted to enable ATP binding activity and ATP hydrolysis activity. Is an ortholog of C. elegans vps-4. In C. elegans, vps-4 is involved in mechanosensory behavior and protein localization to postsynaptic membrane. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE03739.1 CRE03739.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE03739 CRE03739   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cre-vps-4, AACCAACTGTCAATAATACTGATTTGGATCGTTTGGAGGCGTTCAAGAACGATTTTGGAC, WBGene00060554   Expr1093985 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CRE03738, TGGGAGGATATTGCAGGACTCGAAGGAGCAAAAGAGGCATTGAAGGAGGCAGTTATTCTG, WBGene00078389   Expr1093128 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region