WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00053607 Gene Name  Cre-npp-5
Sequence Name  ? CRE01726 Organism  Caenorhabditis remanei
Automated Description  Predicted to be a structural constituent of nuclear pore. Predicted to be part of nuclear pore. Is an ortholog of C. elegans npp-5. In C. elegans, npp-5 is involved in several processes, including kinetochore assembly; protein localization to kinetochore; and regulation of nucleus size. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE01726.1 CRE01726.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE01726 CRE01726   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cre-npp-5, CCCACGAATCAACGGAGATCCCATGTGTGCTCATCGTAAAGAGATACAACAGATTCGAAA, WBGene00053607   Expr1103116 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  part_of

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region