WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00053308 Gene Name  Cre-pah-1
Sequence Name  ? CRE02268 Organism  Caenorhabditis remanei
Automated Description  Predicted to enable iron ion binding activity and phenylalanine 4-monooxygenase activity. Predicted to be involved in L-phenylalanine catabolic process. Is an ortholog of C. elegans pah-1. In C. elegans, pah-1 is involved in several processes, including collagen and cuticulin-based cuticle development; determination of adult lifespan; and erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE02268.1 CRE02268.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE02268 CRE02268   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cre-pah-1, CGAAATTCTTGATAAGGTTGCTGCTCTTCAACGTCTTGCTCGTGATATCAGAAGTGATAT, WBGene00053308   Expr1117818 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

6 GO Annotation

Annotation Extension Qualifier
  involved_in
  involved_in
  enables
  enables
  enables
  enables

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  involved_in
  enables
  enables
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region