WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00042832 Gene Name  Cbr-glb-25
Sequence Name  ? CBG24799 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable heme binding activity and oxygen binding activity. Is an ortholog of C. elegans glb-25. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG24799.1 CBG24799.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG24799 CBG24799   [unknown]

0 RNAi Result

35 Allele

Public Name
WBVar00134700
WBVar00134685
WBVar00134686
WBVar00134687
WBVar00134688
WBVar00134689
WBVar00134690
WBVar00134691
WBVar00134692
WBVar00134693
WBVar00134694
WBVar00134695
WBVar00134696
WBVar00134697
WBVar00134698
WBVar00134699
WBVar00134667
WBVar00134668
WBVar00134669
WBVar00134670
WBVar00134671
WBVar00134672
WBVar00134673
WBVar00134674
WBVar00134675
WBVar00134676
WBVar00134677
WBVar00134678
WBVar00134679
WBVar00134680

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in day 6 adults of C.briggsae AF16 comparing to in day 1 adults of AF16. DESeq2, p < 0.01, fold change > 2. WBPaper00068053:CBG_Day6_vs_Day1_downregulated

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG24801, ACAAAAGTTTGCCATTGCCAGAGCCGGAAGCTGTCAAACCGCTGGATAAGAGAGTCGGAA, WBGene00042833   Expr1057378 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CBG24799, GGCCGAAATGCTCTATAGGAAATTTTTCCAGTTTTGTCTCAAATACCTGCTCGAGGGATT, WBGene00042832   Expr1067532 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region