WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00042500 Gene Name  Cbr-gcy-18
Sequence Name  ? CBG24374 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable protein kinase activity. Predicted to be involved in cyclic nucleotide biosynthetic process; intracellular signal transduction; and protein phosphorylation. Expressed in AFDL and AFDR. Is an ortholog of C. elegans gcy-18. In C. elegans, gcy-18 is involved in detection of temperature stimulus; thermosensory behavior; and thermotaxis. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG24374.1 CBG24374.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG24374 CBG24374   [unknown]

0 RNAi Result

1 Allele

Public Name
WBVar00041979

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Expression tested in C elegans   Expr12205    
Cbr-gcy-18, GTGAAACAGTCAATGGCTAGACGACAAGCTGGAGATATCTATTCGTTTGGAATGGTCATG, WBGene00042500   Expr1062488 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  involved_in
  involved_in
  enables
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  involved_in
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region