WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00042259 Gene Name  Cbr-exc-5
Sequence Name  ? CBG24054 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable guanyl-nucleotide exchange factor activity and metal ion binding activity. Is an ortholog of C. elegans exc-5. In C. elegans, exc-5 is involved in cell morphogenesis; epithelial cell development; and regulation of tube size. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG24054a.1 CBG24054a.1   [unknown]
Transcript:CBG24054b.1 CBG24054b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG24054a CBG24054a   [unknown]
CDS:CBG24054b CBG24054b   [unknown]

0 RNAi Result

27 Allele

Public Name
WBVar00133696
WBVar00133694
WBVar00009149
WBVar00133695
WBVar00009154
WBVar00009159
WBVar00009164
WBVar00140178
WBVar00009104
WBVar00140179
WBVar00009169
WBVar00037394
WBVar00009109
WBVar00009174
WBVar00037399
WBVar00009114
WBVar00009179
WBVar00037404
WBVar00009119
WBVar00009184
WBVar00037409
WBVar00009124
WBVar00009129
WBVar00009134
WBVar00009139
WBVar00133693
WBVar00009144

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-exc-5, GAAAGACATTGAAAAACAAACCGAGTGTGAGGGACTTCCGCTGGTCCATCATTTGATTTG, WBGene00042259   Expr1050714 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region