Genomics
2 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:CBG23894a.1 | CBG23894a.1 | [unknown] | |
| Transcript:CBG23894b.1 | CBG23894b.1 | [unknown] |
Other
2 CDSs
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| CDS:CBG23894a | CBG23894a | [unknown] | |
| CDS:CBG23894b | CBG23894b | [unknown] |
29 Allele
| Public Name |
|---|
| WBVar00044219 |
| WBVar00044224 |
| WBVar00044229 |
| WBVar00133537 |
| WBVar00133540 |
| WBVar00133541 |
| WBVar00133538 |
| WBVar00133539 |
| WBVar00133544 |
| WBVar00133545 |
| WBVar00133542 |
| WBVar00133543 |
| WBVar00133548 |
| WBVar00133549 |
| WBVar00133546 |
| WBVar00133547 |
| WBVar00133552 |
| WBVar00133553 |
| WBVar00133550 |
| WBVar00133551 |
| WBVar00133556 |
| WBVar00133557 |
| WBVar00133554 |
| WBVar00133555 |
| WBVar00133560 |
| WBVar00133561 |
| WBVar00133558 |
| WBVar00133559 |
| WBVar00044214 |
2 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly increased expression in day 9 adults of C.briggsae AF16 comparing to in day 6 adults of AF16. | DESeq2, p < 0.01, fold change > 2. | WBPaper00068053:CBG_Day9_vs_Day6_upregulated | |
| Transcripts that showed significantly decreased expression in day 6 adults of C.briggsae AF16 comparing to in day 1 adults of AF16. | DESeq2, p < 0.01, fold change > 2. | WBPaper00068053:CBG_Day6_vs_Day1_downregulated |
1 Expression Patterns
| Remark | Reporter Gene | Primary Identifier | Pattern | Subcellular Localization |
|---|---|---|---|---|
| CBG23894, AAAGAGGATCTCAAGAAGTTATTCGACTCCGCCATGAATGCTCACAACCAATTGATGGCC, WBGene00042135 | Expr1066053 | Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012 |
