WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00041635 Gene Name  Cbr-hmp-1
Sequence Name  ? CBG23248 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable actin filament binding activity and cadherin binding activity. Predicted to be involved in cell adhesion. Is an ortholog of C. elegans hmp-1. In C. elegans, hmp-1 is involved in several processes, including cell-cell adhesion mediated by cadherin; cortical actin cytoskeleton organization; and embryonic morphogenesis. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG23248a.1 CBG23248a.1   [unknown]
Transcript:CBG23248b.1 CBG23248b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG23248a CBG23248a   [unknown]
CDS:CBG23248b CBG23248b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-hmp-1, GTAAGCTGAACATCGAATGGCGAATGGCTCCTCCAAAGAAGCAGCCACTAGTTCGACCAC, WBGene00041635   Expr1067397 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region