WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040999 Gene Name  Cbr-sart-1
Sequence Name  ? CBG22442 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in mRNA splicing, via spliceosome. Is an ortholog of C. elegans snu-66. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG22442.1 CBG22442.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG22442 CBG22442   [unknown]

0 RNAi Result

18 Allele

Public Name
WBVar00131712
WBVar00005594
WBVar00131713
WBVar00131710
WBVar00131711
WBVar00131716
WBVar00131717
WBVar00131714
WBVar00131715
WBVar00131701
WBVar00131704
WBVar00131705
WBVar00131702
WBVar00131703
WBVar00131708
WBVar00131709
WBVar00131706
WBVar00131707

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG22442, GAAGACGAGCTTCACTCGATTCTGGCGAAGACGCGGAAAGTGAAACAGATTGATGGGAAA, WBGene00040999   Expr1050055 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  involved_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region