WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040962 Gene Name  Cbr-vamp-8
Sequence Name  ? CBG22395 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in vesicle-mediated transport. Predicted to be located in membrane. Is an ortholog of C. elegans vamp-8. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG22395.1 CBG22395.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG22395 CBG22395   [unknown]

0 RNAi Result

38 Allele

Public Name
WBVar00131646
WBVar00131609
WBVar00131612
WBVar00131613
WBVar00131610
WBVar00131611
WBVar00131616
WBVar00131617
WBVar00131614
WBVar00131615
WBVar00131620
WBVar00131621
WBVar00131618
WBVar00131619
WBVar00131624
WBVar00131625
WBVar00131622
WBVar00131623
WBVar00131628
WBVar00131629
WBVar00131626
WBVar00131627
WBVar00131632
WBVar00131633
WBVar00131630
WBVar00131631
WBVar00131636
WBVar00131637
WBVar00131634
WBVar00131635

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG22395, GAAAGTTCTGTATGCTGAATGCAAAATGGACCATCATTCTGGCAATCGTCATCCTCATCG, WBGene00040962   Expr1057235 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  involved_in
  located_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region