WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040862 Gene Name  Cbr-src-1
Sequence Name  ? CBG22259 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable protein tyrosine kinase activity. Predicted to be involved in protein phosphorylation. Is an ortholog of C. elegans src-1. In C. elegans, src-1 is involved in several processes, including anatomical structure morphogenesis; axis specification; and establishment of mitotic spindle orientation. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG22259a.1 CBG22259a.1   [unknown]
Transcript:CBG22259a.2 CBG22259a.2   [unknown]
Transcript:CBG22259b.2 CBG22259b.2   [unknown]
Transcript:CBG22259b.1 CBG22259b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG22259b CBG22259b   [unknown]
CDS:CBG22259a CBG22259a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-src-1, AATGCCACGTGGATGTCCGGAACAAATTTACGAGGAAGTGATGCTCAAATGTTGGGACAA, WBGene00040862   Expr1069737 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region