WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040808 Gene Name  Cbr-ncbp-2
Sequence Name  ? CBG22194 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable RNA cap binding activity. Predicted to be involved in mRNA cis splicing, via spliceosome. Predicted to be part of nuclear cap binding activity complex. Is an ortholog of C. elegans ncbp-2. In C. elegans, ncbp-2 is involved in primary miRNA processing. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG22194.1 CBG22194.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG22194 CBG22194   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-ncbp-2, GAAAGGATTACGATCCGGAGAGAGGAGGATACAATCGAGCGATCGCTCAGAAAAGTATGG, WBGene00040808   Expr1061429 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  part_of
  enables
  enables

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  part_of
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region