WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040758 Gene Name  Cbr-spe-48
Sequence Name  ? CBG22135 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ubiquitin binding activity. Predicted to be involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway. Predicted to be part of ESCRT I complex. Is an ortholog of C. elegans spe-48. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG22135a.1 CBG22135a.1   [unknown]
Transcript:CBG22135b.1 CBG22135b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG22135a CBG22135a   [unknown]
CDS:CBG22135b CBG22135b   [unknown]

0 RNAi Result

23 Allele

Public Name
WBVar00033402
WBVar00131134
WBVar00131135
WBVar00131116
WBVar00131117
WBVar00131114
WBVar00131115
WBVar00131120
WBVar00131121
WBVar00131118
WBVar00131119
WBVar00131124
WBVar00131125
WBVar00131122
WBVar00131123
WBVar00131128
WBVar00131129
WBVar00131126
WBVar00131127
WBVar00131132
WBVar00131133
WBVar00131130
WBVar00131131

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG22135, CTGGAATGAGTACGGTAGATCAAACGCTTCCATTCTTGATTCAATGCGAATTGAGTGATA, WBGene00040758   Expr1056986 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  part_of

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region