WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040422 Gene Name  Cbr-rap-1
Sequence Name  ? CBG21720 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in signal transduction. Predicted to be located in membrane. Is an ortholog of C. elegans rap-1. In C. elegans, rap-1 is involved in collagen and cuticulin-based cuticle development and epidermis development. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG21720.1 CBG21720.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG21720 CBG21720   [unknown]

0 RNAi Result

9 Allele

Public Name
WBVar00130351
WBVar00130350
WBVar00130353
WBVar00130352
WBVar00130355
WBVar00130354
WBVar00130357
WBVar00130356
WBVar00130349

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-rap-1, GTAGGCAACAAGTGTGATTTGGAGGACGAGCGTGTCGTTGGCAAAGATCAGGGACAGAAT, WBGene00040422   Expr1069877 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in
  located_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region