WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040079 Gene Name  Cbr-mpk-1
Sequence Name  ? CBG21247 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable ATP binding activity and MAP kinase activity. Predicted to be involved in protein phosphorylation. Is an ortholog of C. elegans mpk-1. In C. elegans, mpk-1 is involved in several processes, including intracellular signaling cassette; oocyte maturation; and positive regulation of macromolecule metabolic process. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG21247b.1 CBG21247b.1   [unknown]
Transcript:CBG21247a.3 CBG21247a.3   [unknown]
Transcript:CBG21247a.2 CBG21247a.2   [unknown]
Transcript:CBG21247a.1 CBG21247a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG21247a CBG21247a   [unknown]
CDS:CBG21247b CBG21247b   [unknown]

0 RNAi Result

22 Allele

Public Name
WBVar00129727
WBVar00030747
WBVar00129726
WBVar00129729
WBVar00129728
WBVar00030717
WBVar00129731
WBVar00129730
WBVar00030752
WBVar00129732
WBVar00030722
WBVar00030757
WBVar00044007
WBVar00030727
WBVar00030762
WBVar00030732
WBVar00030737
WBVar00030742
WBVar00129723
WBVar00129722
WBVar00129725
WBVar00129724

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG26059, AACGCGCGGACCACGAATACGATAGGCAAATATGGACACAACGGCTATAAGCAACGGGTG, WBGene00087473   Expr1069904 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cbr-mpk-1, GTTCACTCTGGAAATGGAATTTGACGATTTGCCAAAGGAGCGGCTGAAGGAGCTGATTTG, WBGene00040079   Expr1066728 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  enables
  enables

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region