WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00040068 Gene Name  Cbr-sftb-1
Sequence Name  ? CBG21228 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable mRNA binding activity. Predicted to be involved in spliceosomal complex assembly. Is an ortholog of C. elegans sftb-1. In C. elegans, sftb-1 is involved in negative regulation of gene expression. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG21228.1 CBG21228.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG21228 CBG21228   [unknown]

0 RNAi Result

45 Allele

Public Name
WBVar00139558
WBVar00139559
WBVar00139560
WBVar00139561
WBVar00139552
WBVar00139553
WBVar00139551
WBVar00139556
WBVar00139557
WBVar00139554
WBVar00139555
WBVar00129599
WBVar00129598
WBVar00129601
WBVar00129600
WBVar00129603
WBVar00129602
WBVar00129605
WBVar00129604
WBVar00129607
WBVar00129606
WBVar00129609
WBVar00129608
WBVar00129611
WBVar00129610
WBVar00129613
WBVar00129612
WBVar00129615
WBVar00129614
WBVar00129617

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG21228, CGTATCGAAAACACGCCCACCAATCAATACGTTCGATATGAACTGGATTATGTCCTCTAA, WBGene00040068   Expr1058380 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region