WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039746 Gene Name  Cbr-daf-5
Sequence Name  ? CBG20832 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable SMAD binding activity. Is an ortholog of C. elegans daf-5. In C. elegans, daf-5 is involved in several processes, including determination of adult lifespan; positive regulation of dauer larval development; and transforming growth factor beta receptor signaling pathway. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG20832.1 CBG20832.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG20832 CBG20832   [unknown]

0 RNAi Result

14 Allele

Public Name
WBVar00129055
WBVar00129056
WBVar00129057
WBVar00129058
WBVar00129059
WBVar00129063
WBVar00129064
WBVar00129065
WBVar00129066
WBVar00129060
WBVar00129061
WBVar00129062
WBVar00129067
WBVar00129068

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-daf-5, AGTGTGGATTAAAGAACACGAGTTTGCTAAGAAATGCGAACTACAAAAGAAGCATTGGGA, WBGene00039746   Expr1064113 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region