WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039326 Gene Name  CBG20309
Sequence Name  ? CBG20309 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable catalytic activity. Predicted to be involved in aromatic amino acid metabolic process. Predicted to be located in cytoplasm. Is an ortholog of C. elegans Y53G8B.1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG20309a.1 CBG20309a.1   [unknown]
Transcript:CBG20309b.1 CBG20309b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG20309a CBG20309a   [unknown]
CDS:CBG20309b CBG20309b   [unknown]

0 RNAi Result

2 Allele

Public Name
WBVar00028827
WBVar00028832

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG20309, CAAAAAACTGGCTGAAATTCCCGAATTTCAGACAGCGGAGCCAGCTCGGCAACCGGATGC, WBGene00039326   Expr1050814 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region