WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039264 Gene Name  Cbr-eat-3
Sequence Name  ? CBG20228 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans eat-3. In C. elegans, eat-3 is involved in several processes, including mitochondrial fusion; nematode larval development; and response to superoxide. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG20228.1 CBG20228.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG20228 CBG20228   [unknown]

0 RNAi Result

31 Allele

Public Name
WBVar00050909
WBVar00050904
WBVar00050889
WBVar00050894
WBVar00050899
WBVar00019999
WBVar00019994
WBVar00019989
WBVar00128348
WBVar00128347
WBVar00128351
WBVar00128350
WBVar00128352
WBVar00128349
WBVar00028732
WBVar00020029
WBVar00020034
WBVar00028687
WBVar00028692
WBVar00028697
WBVar00028702
WBVar00028707
WBVar00020004
WBVar00028712
WBVar00020009
WBVar00028717
WBVar00020014
WBVar00028722
WBVar00020019
WBVar00028727

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-eat-3, CAGAAAATGGTGAATTTGACGTGCAACGCGCTCAGGCAGCAGATCACGAACACCGAGCAC, WBGene00039264   Expr1062379 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region