WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039262 Gene Name  Cbr-eif-3.F
Sequence Name  ? CBG20226 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable metallopeptidase activity; translation initiation factor activity; and translation initiation factor binding activity. Predicted to be involved in translational initiation. Predicted to be part of eukaryotic translation initiation factor 3 complex. Is an ortholog of C. elegans eif-3.F. In C. elegans, eif-3.F is involved in translation. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG20226.1 CBG20226.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG20226 CBG20226   [unknown]

0 RNAi Result

13 Allele

Public Name
WBVar00050884
WBVar00050879
WBVar00050874
WBVar00050869
WBVar00050864
WBVar00128340
WBVar00128344
WBVar00128343
WBVar00128342
WBVar00128341
WBVar00128346
WBVar00128345
WBVar00128339

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-eif-3.F, GTCAATAAGGACGGTGAGAAGCCGGGAGACGCTCAAATCGGTCGTCAACTCATGGATATT, WBGene00039262   Expr1055195 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

6 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  involved_in
  part_of

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  involved_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region