WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039259 Gene Name  Cbr-cam-1
Sequence Name  ? CBG20223 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable protein tyrosine kinase activity. Predicted to be involved in cell surface receptor protein tyrosine kinase signaling pathway and protein phosphorylation. Is an ortholog of C. elegans cam-1. In C. elegans, cam-1 is involved in generation of neurons and neuroblast migration. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG20223b.1 CBG20223b.1   [unknown]
Transcript:CBG20223a.1 CBG20223a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG20223a CBG20223a   [unknown]
CDS:CBG20223b CBG20223b   [unknown]

0 RNAi Result

43 Allele

Public Name
WBVar00139160
WBVar00139161
WBVar00139162
WBVar00139152
WBVar00139153
WBVar00139150
WBVar00139151
WBVar00139156
WBVar00139157
WBVar00139154
WBVar00139155
WBVar00139158
WBVar00139159
WBVar00050794
WBVar00050799
WBVar00050809
WBVar00050804
WBVar00050824
WBVar00050829
WBVar00050814
WBVar00050819
WBVar00050784
WBVar00050789
WBVar00050779
WBVar00050774
WBVar00128322
WBVar00128321
WBVar00128320
WBVar00128326
WBVar00128325

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG25460, AAGACGACGATTTAGTCATCGAGCCAGCCGACGATGAGGGTCTTCACTATGGAAATGCGT, WBGene00086874   Expr1050301 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cbr-cam-1, AACCATACGAAGGGGCAACGAATCAGCAAGTGATTGAGCTGATTGCGAATCGCCATCTGC, WBGene00039259   Expr1063437 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region