WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039199 Gene Name  Cbr-cyp-25A2
Sequence Name  ? CBG20140 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable heme binding activity; iron ion binding activity; and oxidoreductase activity. Is an ortholog of C. elegans cyp-25A2. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG20140.1 CBG20140.1   [unknown]
Transcript:CBG20140.2 CBG20140.2   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG20140 CBG20140   [unknown]

0 RNAi Result

78 Allele

Public Name
WBVar00137548
WBVar00137547
WBVar00137549
WBVar00137551
WBVar00137550
WBVar00137552
cbp40296
cbp40297
cbp40298
cbp40299
cbp40294
cbp40295
cbp40300
cbp40149
cbp40150
cbp40151
cbp40148
cbp40156
cbp40157
cbp40158
cbp40159
cbp40152
cbp40153
cbp40154
cbp40155
WBVar00043622
WBVar00054754
WBVar00054759
WBVar00054729
WBVar00054724

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in day 6 adults of C.briggsae AF16 comparing to in day 3 adults of AF16. DESeq2, p < 0.01, fold change > 2. WBPaper00068053:CBG_Day6_vs_Day3_upregulated

0 Expression Patterns

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  enables

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region