WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00039074 Gene Name  Cbr-sand-1
Sequence Name  ? CBG19957 Organism  Caenorhabditis briggsae
Automated Description  Predicted to be involved in protein targeting to vacuole and vesicle-mediated transport. Is an ortholog of C. elegans sand-1. In C. elegans, sand-1 is involved in several processes, including nematode larval development; regulation of cellular localization; and vesicle-mediated transport. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG19957.1 CBG19957.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG19957 CBG19957   [unknown]

0 RNAi Result

23 Allele

Public Name
WBVar00039609
WBVar00039604
WBVar00039619
WBVar00039614
WBVar00127930
WBVar00127923
WBVar00127927
WBVar00127926
WBVar00127925
WBVar00127924
WBVar00127929
WBVar00127928
WBVar00127941
WBVar00127940
WBVar00127934
WBVar00127933
WBVar00127932
WBVar00127931
WBVar00127938
WBVar00127937
WBVar00127936
WBVar00127935
WBVar00127939

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-sand-1, CAAGCTGTGAAGACGCCGAATCTGTATCAGATCTCACAAATCGGATCGAATTCTGAATCA, WBGene00039074   Expr1067683 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  involved_in
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region