WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00038915 Gene Name  Cbr-hmp-2
Sequence Name  ? CBG19745 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable cadherin binding activity. Predicted to be involved in cell adhesion. Is an ortholog of C. elegans hmp-2. In C. elegans, hmp-2 is involved in several processes, including cell-cell adhesion mediated by cadherin; cytoskeleton organization; and embryonic morphogenesis. Biotype  SO:0001217
Genetic Position  :±
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This Gene isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG19745.1 CBG19745.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG19745 CBG19745   [unknown]

0 RNAi Result

13 Allele

Public Name
WBVar00001189
WBVar00001174
WBVar00001169
WBVar00001184
WBVar00001179
WBVar00001164
WBVar00028314
WBVar00028319
WBVar00028324
WBVar00028329
WBVar00028334
WBVar00028304
WBVar00028309

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-hmp-2, AGTGTTGAATAACTTGAAGCGAGGAGAGAATGTGGCCACGCATGGTGGAAGCGCAATGAA, WBGene00038915   Expr1064437 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region