WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00038662 Gene Name  Cbr-adr-1
Sequence Name  ? CBG19440 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable RNA binding activity and adenosine deaminase activity. Predicted to be involved in RNA processing. Is an ortholog of C. elegans adr-1. In C. elegans, adr-1 is involved in several processes, including adenosine to inosine editing; determination of adult lifespan; and regulation of vulval development. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG19440b.1 CBG19440b.1   [unknown]
Transcript:CBG19440a.1 CBG19440a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG19440a CBG19440a   [unknown]
CDS:CBG19440b CBG19440b   [unknown]

0 RNAi Result

21 Allele

Public Name
WBVar00138964
WBVar00138952
WBVar00138955
WBVar00138956
WBVar00138953
WBVar00138954
WBVar00138959
WBVar00138957
WBVar00138958
WBVar00138962
WBVar00138963
WBVar00138960
WBVar00138961
WBVar00014729
WBVar00127435
WBVar00127434
WBVar00127440
WBVar00127439
WBVar00127438
WBVar00127437
WBVar00127436

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-adr-1, AAAATGGCAAACGAAGCCGATGGAGCTCGTCGACTCGTTCACCCTTCCAGCTTCCTTTAA, WBGene00038662   Expr1055962 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region