WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00038604 Gene Name  Cbr-unc-42
Sequence Name  ? CBG19368 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable DNA binding activity. Is an ortholog of C. elegans unc-42. In C. elegans, unc-42 is involved in several processes, including larval locomotory behavior; neuron differentiation; and positive regulation of transcription by RNA polymerase II. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG19368d.1 CBG19368d.1   [unknown]
Transcript:CBG19368c.1 CBG19368c.1   [unknown]
Transcript:CBG19368b.1 CBG19368b.1   [unknown]
Transcript:CBG19368a.1 CBG19368a.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG19368b CBG19368b   [unknown]
CDS:CBG19368a CBG19368a   [unknown]
CDS:CBG19368d CBG19368d   [unknown]
CDS:CBG19368c CBG19368c   [unknown]

0 RNAi Result

1 Allele

Public Name
WBVar00026597

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-unc-42, CAACTCCATCGGCTACCACAACAGCCACCTCTTTGGCCAACATCAACTATCAACAGCAGC, WBGene00038604   Expr1066958 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region