WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00038595 Gene Name  Cbr-aagr-3
Sequence Name  ? CBG19359 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable carbohydrate binding activity and hydrolase activity, hydrolyzing O-glycosyl compounds. Predicted to be involved in carbohydrate metabolic process. Is an ortholog of C. elegans aagr-3. In C. elegans, aagr-3 is involved in glycogen catabolic process. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG19359b.1 CBG19359b.1   [unknown]
Transcript:CBG19359a.1 CBG19359a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG19359b CBG19359b   [unknown]
CDS:CBG19359a CBG19359a   [unknown]

0 RNAi Result

3 Allele

Public Name
WBVar00026522
WBVar00026527
WBVar00026517

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG19359, ACGATCATGATATGCCAATGGATGTCATTTGGCTAGATATTGAACATACCGATGGAAAGA, WBGene00038595   Expr1061622 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region