WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00038118 Gene Name  Cbr-nkcc-1
Sequence Name  ? CBG18756 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable transmembrane transporter activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans nkcc-1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG18756b.1 CBG18756b.1   [unknown]
Transcript:CBG18756a.1 CBG18756a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG18756a CBG18756a   [unknown]
CDS:CBG18756b CBG18756b   [unknown]

0 RNAi Result

15 Allele

Public Name
WBVar00037789
WBVar00037794
WBVar00037799
WBVar00037749
WBVar00037759
WBVar00037754
WBVar00037769
WBVar00037764
WBVar00037774
WBVar00037779
WBVar00037784
WBVar00126920
WBVar00126919
WBVar00126918
WBVar00126917

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cbr-nkcc-1, GAAAAGGAATGGTCTCCTCATCGCTCTACCTGTCTTGGCTGGAAGTGATGACTCGAAATC, WBGene00038118   Expr1067414 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  located_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region