WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00037522 Gene Name  Cbr-ppm-2
Sequence Name  ? CBG18025 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable protein serine/threonine phosphatase activity. Predicted to be involved in protein dephosphorylation. Is an ortholog of C. elegans ppm-2. In C. elegans, ppm-2 is involved in negative regulation of axon extension and positive regulation of synapse assembly. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG18025a.1 CBG18025a.1   [unknown]
Transcript:CBG18025b.1 CBG18025b.1   [unknown]
Transcript:CBG18025c.1 CBG18025c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG18025a CBG18025a   [unknown]
CDS:CBG18025c CBG18025c   [unknown]
CDS:CBG18025b CBG18025b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG18025, CATTGTTCTGGCATGCGATGGTATTTGGGATGTAATGACAAACCAAGAAGTTGTCGATTT, WBGene00037522   Expr1063156 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region