WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00037257 Gene Name  Cbr-atic-1
Sequence Name  ? CBG17698 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable IMP cyclohydrolase activity and phosphoribosylaminoimidazolecarboxamide formyltransferase activity. Predicted to be involved in purine nucleotide biosynthetic process. Is an ortholog of C. elegans atic-1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG17698b.1 CBG17698b.1   [unknown]
Transcript:CBG17698a.1 CBG17698a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG17698a CBG17698a   [unknown]
CDS:CBG17698b CBG17698b   [unknown]

0 RNAi Result

14 Allele

Public Name
WBVar00138646
WBVar00138645
WBVar00138648
WBVar00138647
WBVar00138649
WBVar00032014
WBVar00032009
WBVar00032004
WBVar00125690
WBVar00125691
WBVar00125689
WBVar00125687
WBVar00125688
WBVar00125686

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG17698, CATCGGAGACTGAGGAACGTACTGTATTTGGGTTGAGACTTCGACAAAAACGAAACAATG, WBGene00037257   Expr1052672 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  enables
  enables

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region