WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00037203 Gene Name  CBG17632
Sequence Name  ? CBG17632 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable NADP binding activity and phosphogluconate dehydrogenase (decarboxylating) activity. Predicted to be involved in pentose-phosphate shunt. Is an ortholog of C. elegans T25B9.9. In C. elegans, T25B9.9 is involved in defense response to Gram-negative bacterium and negative regulation of gene expression. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG17632.1 CBG17632.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG17632 CBG17632   [unknown]

0 RNAi Result

8 Allele

Public Name
WBVar00004409
WBVar00125645
WBVar00125646
WBVar00125643
WBVar00125644
WBVar00125647
WBVar00125641
WBVar00125642

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG17632, TACGCTCAAGGATTCATGCTCCTTGCCGAGACTTCCAAGCAATTCAACTGGGATTTGAAT, WBGene00037203   Expr1067487 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region