WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00037082 Gene Name  CBG17472
Sequence Name  ? CBG17472 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides. Predicted to be involved in L-histidine catabolic process to glutamate and formamide. Predicted to be located in cytoplasm. Is an ortholog of C. elegans amdh-1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG17472.1 CBG17472.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG17472 CBG17472   [unknown]

0 RNAi Result

44 Allele

Public Name
WBVar00125455
WBVar00125454
WBVar00125457
WBVar00125456
WBVar00125459
WBVar00125458
WBVar00125461
WBVar00125460
WBVar00125462
WBVar00125453
WBVar00125452
WBVar00125450
WBVar00125451
WBVar00125447
WBVar00125448
WBVar00125446
WBVar00125449
WBVar00125472
WBVar00125473
WBVar00125470
WBVar00125471
WBVar00125476
WBVar00125477
WBVar00125474
WBVar00125475
WBVar00125469
WBVar00125467
WBVar00125468
WBVar00125465
WBVar00125466

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG17472, AAAAATTCTGAAACGAGGACAGGAGGCTGGAATGGCGGTGAATTTCCATGCGGAAGAGCT, WBGene00037082   Expr1061973 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  located_in

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region